Package index
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add_prefix() - Add rank prefixes to taxonomic matrix values.
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bray_curtis_dist() - Bray-Curtis dissimilarity matrix
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deseq_normalize() - DESeq2 Size Factor Normalization
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edgelist_to_phylo() - Convert an edge list to an ape phylo object.
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node_hierarchy() - Construct Initial Hierarchy
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node_totals() - Compute Node Totals
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phylobar() - Tree + Stacked Bars
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phylobar_data() - Prepare tree data for phylobar visualization
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subset_cluster() - Subsample rows of a matrix using clustering
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taxonomy_to_tree() - Convert a taxonomic table to an ape phylo object.